Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm8241-201ENSMUST00000189286 816 ntBASIC4.72□□□□□ -1.65
Cdx1P18111 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC4.72□□□□□ -1.65
Cdx1P18111 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx1P18111 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Cdx1P18111 Igkv12-67-201ENSMUST00000197806 354 ntBASIC4.72□□□□□ -1.65
Cdx1P18111 Gm43717-201ENSMUST00000198684 310 ntBASIC4.72□□□□□ -1.65
Cdx1P18111 Gm7166-201ENSMUST00000199715 303 ntBASIC4.72□□□□□ -1.65
Cdx1P18111 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC4.72□□□□□ -1.65
Cdx1P18111 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.72□□□□□ -1.65
Cdx1P18111 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC4.72□□□□□ -1.65
Cdx1P18111 Gm3912-203ENSMUST00000211024 367 ntBASIC4.72□□□□□ -1.65
Cdx1P18111 Gm19936-201ENSMUST00000216414 838 ntBASIC4.72□□□□□ -1.65
Cdx1P18111 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC4.72□□□□□ -1.65
Cdx1P18111 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Cdx1P18111 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx1P18111 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx1P18111 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx1P18111 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC4.72□□□□□ -1.65
Cdx1P18111 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC4.72□□□□□ -1.65
Cdx1P18111 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Cdx1P18111 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.72□□□□□ -1.65
Cdx1P18111 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Cdx1P18111 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx1P18111 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx1P18111 Gm37255-201ENSMUST00000193302 3060 ntBASIC4.72□□□□□ -1.65
Cdx1P18111 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx1P18111 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx1P18111 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Cdx1P18111 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx1P18111 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC4.72□□□□□ -1.65
Cdx1P18111 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdx1P18111 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Cdx1P18111 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.71□□□□□ -1.65
Cdx1P18111 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Cdx1P18111 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Cdx1P18111 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Cdx1P18111 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Cdx1P18111 Gm43162-201ENSMUST00000198292 1770 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx1P18111 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx1P18111 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm25346-201ENSMUST00000104509 128 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm12931-201ENSMUST00000117046 324 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm4342-201ENSMUST00000118982 367 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm12262-201ENSMUST00000119915 305 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm12618-201ENSMUST00000121754 483 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm15300-201ENSMUST00000122324 279 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm23884-201ENSMUST00000122687 294 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdx1P18111 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdx1P18111 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm26410-201ENSMUST00000157670 261 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm24687-201ENSMUST00000157758 241 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm26162-201ENSMUST00000157793 132 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm9064-201ENSMUST00000163579 566 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Mir5110-201ENSMUST00000175537 87 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx1P18111 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx1P18111 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm29519-201ENSMUST00000186994 398 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm38166-201ENSMUST00000191660 471 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm37463-201ENSMUST00000193819 796 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm8874-201ENSMUST00000196826 286 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm29778-201ENSMUST00000201667 466 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdx1P18111 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm2961-201ENSMUST00000211074 772 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Gm18103-201ENSMUST00000216621 779 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 AC153357.1-201ENSMUST00000219190 482 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 AC140930.1-201ENSMUST00000221889 389 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 AC137871.3-201ENSMUST00000226628 225 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx1P18111 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx1P18111 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Olfr519-201ENSMUST00000084752 960 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx1P18111 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx1P18111 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx1P18111 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx1P18111 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cdx1P18111 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms