Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Col1a1P11087 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col1a1P11087 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col1a1P11087 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col1a1P11087 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col1a1P11087 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col1a1P11087 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Col1a1P11087 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.55□□□□□ -1.36
Col1a1P11087 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col1a1P11087 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.55□□□□□ -1.36
Col1a1P11087 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col1a1P11087 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
Col1a1P11087 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col1a1P11087 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col1a1P11087 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col1a1P11087 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col1a1P11087 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col1a1P11087 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.54□□□□□ -1.36
Col1a1P11087 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm15670-201ENSMUST00000117740 447 ntBASIC6.54□□□□□ -1.36
Col1a1P11087 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.54□□□□□ -1.36
Col1a1P11087 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm20203-201ENSMUST00000192352 332 ntBASIC6.54□□□□□ -1.36
Col1a1P11087 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm45405-201ENSMUST00000211544 609 ntBASIC6.54□□□□□ -1.36
Col1a1P11087 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.54□□□□□ -1.36
Col1a1P11087 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.54□□□□□ -1.36
Col1a1P11087 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.54□□□□□ -1.36
Col1a1P11087 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col1a1P11087 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col1a1P11087 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col1a1P11087 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm43014-201ENSMUST00000198568 2443 ntBASIC6.54□□□□□ -1.36
Col1a1P11087 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Col1a1P11087 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.54□□□□□ -1.36
Col1a1P11087 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col1a1P11087 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm14874-201ENSMUST00000118995 438 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm25176-201ENSMUST00000122640 125 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm16345-201ENSMUST00000146065 158 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm7316-201ENSMUST00000165395 445 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm23872-201ENSMUST00000175432 77 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Mir7012-201ENSMUST00000183900 64 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm37336-202ENSMUST00000193705 468 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm42452-201ENSMUST00000199749 617 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.53□□□□□ -1.36
Col1a1P11087 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col1a1P11087 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm6104-201ENSMUST00000078030 603 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm25147-201ENSMUST00000083030 105 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col1a1P11087 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col1a1P11087 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm44829-201ENSMUST00000208008 3193 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm37057-201ENSMUST00000192624 1916 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.53□□□□□ -1.36
Col1a1P11087 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col1a1P11087 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms