Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm25083-201ENSMUST00000102319 92 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm22707-201ENSMUST00000103834 110 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm14050-201ENSMUST00000117052 346 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm14450-201ENSMUST00000119984 240 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 n-R5s47-201ENSMUST00000122516 119 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxd3P09027 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm7418-201ENSMUST00000162120 801 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxd3P09027 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm24923-201ENSMUST00000178201 88 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm26923-201ENSMUST00000182615 996 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm20111-201ENSMUST00000184830 319 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm28894-201ENSMUST00000185214 615 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm37369-201ENSMUST00000194179 615 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm43542-201ENSMUST00000199505 379 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm18765-201ENSMUST00000203166 660 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxd3P09027 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxd3P09027 AC163296.1-202ENSMUST00000218395 661 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm46234-201ENSMUST00000218702 259 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm9231-201ENSMUST00000220817 1009 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm46996-201ENSMUST00000220924 408 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Hoxd3P09027 AC152940.1-201ENSMUST00000226504 139 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm23406-201ENSMUST00000082537 122 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm23096-201ENSMUST00000083447 107 ntBASIC5.9□□□□□ -1.46
Hoxd3P09027 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
Hoxd3P09027 Gm38070-201ENSMUST00000191850 6480 ntBASIC5.9□□□□□ -1.47
Hoxd3P09027 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.9□□□□□ -1.47
Hoxd3P09027 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hoxd3P09027 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
Hoxd3P09027 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hoxd3P09027 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.9□□□□□ -1.47
Hoxd3P09027 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
Hoxd3P09027 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Hoxd3P09027 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hoxd3P09027 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 AC140280.1-201ENSMUST00000227826 1847 ntBASIC5.9□□□□□ -1.47
Hoxd3P09027 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Gm44950-201ENSMUST00000206403 2296 ntBASIC5.9□□□□□ -1.47
Hoxd3P09027 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Gm45537-201ENSMUST00000211539 2708 ntBASIC5.9□□□□□ -1.47
Hoxd3P09027 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxd3P09027 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm42700-201ENSMUST00000199071 2437 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm37510-201ENSMUST00000194151 4762 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms