Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TnfP06804 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
TnfP06804 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.92□□□□□ -1.46
TnfP06804 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TnfP06804 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TnfP06804 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.91□□□□□ -1.46
TnfP06804 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TnfP06804 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
TnfP06804 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.91□□□□□ -1.46
TnfP06804 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TnfP06804 Gm11561-201ENSMUST00000117429 417 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm11270-201ENSMUST00000117685 471 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm11984-201ENSMUST00000118142 766 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm14871-201ENSMUST00000119056 194 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm14472-201ENSMUST00000119815 282 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm11804-201ENSMUST00000121663 468 ntBASIC5.91□□□□□ -1.46
TnfP06804 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.91□□□□□ -1.46
TnfP06804 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Gm22895-201ENSMUST00000157508 308 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.91□□□□□ -1.46
TnfP06804 Gm17044-201ENSMUST00000168549 828 ntBASIC5.91□□□□□ -1.46
TnfP06804 Mir3080-201ENSMUST00000175010 79 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Gm28429-201ENSMUST00000188521 363 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.91□□□□□ -1.46
TnfP06804 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.91□□□□□ -1.46
TnfP06804 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm4374-201ENSMUST00000204929 424 ntBASIC5.91□□□□□ -1.46
TnfP06804 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.91□□□□□ -1.46
TnfP06804 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.91□□□□□ -1.46
TnfP06804 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TnfP06804 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
TnfP06804 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.91□□□□□ -1.46
TnfP06804 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.91□□□□□ -1.46
TnfP06804 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TnfP06804 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TnfP06804 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Gm23686-201ENSMUST00000083241 164 ntBASIC5.91□□□□□ -1.46
TnfP06804 Mir337-201ENSMUST00000083592 97 ntBASIC5.91□□□□□ -1.46
TnfP06804 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.91□□□□□ -1.46
TnfP06804 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TnfP06804 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.91□□□□□ -1.46
TnfP06804 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TnfP06804 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.91□□□□□ -1.46
TnfP06804 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TnfP06804 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.91□□□□□ -1.46
TnfP06804 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.91□□□□□ -1.46
TnfP06804 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TnfP06804 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TnfP06804 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TnfP06804 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TnfP06804 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.9□□□□□ -1.46
TnfP06804 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TnfP06804 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.9□□□□□ -1.46
TnfP06804 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.9□□□□□ -1.46
TnfP06804 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TnfP06804 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
TnfP06804 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TnfP06804 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TnfP06804 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.9□□□□□ -1.46
TnfP06804 Gm13887-201ENSMUST00000119009 344 ntBASIC5.9□□□□□ -1.46
TnfP06804 Gm15152-201ENSMUST00000121540 394 ntBASIC5.9□□□□□ -1.46
TnfP06804 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.9□□□□□ -1.46
TnfP06804 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.9□□□□□ -1.46
TnfP06804 Gm22916-201ENSMUST00000157616 119 ntBASIC5.9□□□□□ -1.46
TnfP06804 Gm23872-201ENSMUST00000175432 77 ntBASIC5.9□□□□□ -1.46
TnfP06804 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.9□□□□□ -1.46
TnfP06804 Gm22420-201ENSMUST00000178795 126 ntBASIC5.9□□□□□ -1.46
TnfP06804 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
TnfP06804 Gm28017-201ENSMUST00000183434 126 ntBASIC5.9□□□□□ -1.46
TnfP06804 Mir7087-201ENSMUST00000184840 70 ntBASIC5.9□□□□□ -1.46
TnfP06804 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TnfP06804 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.9□□□□□ -1.46
TnfP06804 Gm38040-201ENSMUST00000193505 225 ntBASIC5.9□□□□□ -1.46
TnfP06804 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.9□□□□□ -1.46
TnfP06804 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.9□□□□□ -1.46
TnfP06804 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.9□□□□□ -1.46
TnfP06804 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.9□□□□□ -1.46
TnfP06804 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.9□□□□□ -1.46
TnfP06804 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.9□□□□□ -1.46
TnfP06804 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.9□□□□□ -1.46
TnfP06804 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.9□□□□□ -1.46
TnfP06804 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.9□□□□□ -1.46
TnfP06804 Thoc7-209ENSMUST00000225325 765 ntBASIC5.9□□□□□ -1.46
TnfP06804 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.9□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms