Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Mir6917-201ENSMUST00000184111 61 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 AC124414.1-201ENSMUST00000218033 2946 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm14687-201ENSMUST00000120206 363 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm24553-201ENSMUST00000158653 131 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm8823-201ENSMUST00000193158 433 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Mir129b-201ENSMUST00000197461 65 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Gm5924-201ENSMUST00000132554 871 ntBASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Gm18462-201ENSMUST00000208112 417 ntBASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Specc1l-202ENSMUST00000105421 6632 ntTSL 5 BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Gm12931-201ENSMUST00000117046 324 ntBASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Gm23993-201ENSMUST00000157478 144 ntBASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC5.34□□□□□ -1.55
Col6a3E9PWQ3 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 AC183268.1-201ENSMUST00000215753 2837 ntBASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a3E9PWQ3 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm15779-201ENSMUST00000117470 412 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm24103-201ENSMUST00000174930 77 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Mir7118-201ENSMUST00000197760 61 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm37206-201ENSMUST00000195512 3069 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm13220-201ENSMUST00000121535 508 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms