Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm13768-201ENSMUST00000116469 929 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm14294-201ENSMUST00000119749 751 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm16471-201ENSMUST00000121940 618 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm14713-201ENSMUST00000122362 686 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm17043-201ENSMUST00000164621 1283 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Mir7212-201ENSMUST00000184098 61 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm6546-201ENSMUST00000192096 766 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm42796-201ENSMUST00000199913 1087 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 BC049739-201ENSMUST00000202626 660 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm44277-201ENSMUST00000205128 649 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 AC131068.1-201ENSMUST00000226891 482 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 AC149294.7-201ENSMUST00000227475 1432 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx56Q9D0R4 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm11256-201ENSMUST00000118109 829 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm12448-201ENSMUST00000118852 655 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm14986-201ENSMUST00000121262 1002 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm6541-201ENSMUST00000165542 561 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm9931-201ENSMUST00000193584 1185 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm3544-201ENSMUST00000196129 305 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm43992-201ENSMUST00000204358 197 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm5318-201ENSMUST00000205249 406 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm18585-201ENSMUST00000215197 556 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm7413-201ENSMUST00000219498 462 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Gm2614-201ENSMUST00000223227 403 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.48□□□□□ -1.37
Ddx56Q9D0R4 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms