Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm26570-201ENSMUST00000180672 342 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm27342-201ENSMUST00000183530 109 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm27976-201ENSMUST00000183635 162 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm37501-201ENSMUST00000192830 691 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 AC167013.2-202ENSMUST00000227035 333 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm6776-201ENSMUST00000057752 900 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Olfr519-201ENSMUST00000084752 960 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm24888-201ENSMUST00000104387 130 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm12447-201ENSMUST00000119110 470 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm12433-201ENSMUST00000119659 255 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm9005-201ENSMUST00000119908 607 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm14613-201ENSMUST00000122239 752 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm23885-201ENSMUST00000122682 294 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm26346-201ENSMUST00000157525 329 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm26162-201ENSMUST00000157793 132 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm24734-201ENSMUST00000158860 262 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm22701-201ENSMUST00000175371 291 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm27317-201ENSMUST00000183533 95 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm27152-201ENSMUST00000183828 99 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm27985-201ENSMUST00000185112 378 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm28413-201ENSMUST00000189369 291 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm18849-201ENSMUST00000189861 560 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm43276-201ENSMUST00000199712 364 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm19237-201ENSMUST00000205036 1132 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm18557-201ENSMUST00000218710 433 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm8724-201ENSMUST00000081668 483 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm22287-201ENSMUST00000083197 107 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Gm45872-201ENSMUST00000209804 1584 ntBASIC7.2□□□□□ -1.26
Clp1Q99LI9 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clp1Q99LI9 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms