Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Mir700-201ENSMUST00000102169 79 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm23311-201ENSMUST00000104152 134 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm14756-201ENSMUST00000116395 240 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm12641-201ENSMUST00000117874 985 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Zfp389-201ENSMUST00000118425 675 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm9005-201ENSMUST00000119908 607 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm12583-201ENSMUST00000120677 853 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm15300-201ENSMUST00000122324 279 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm22867-201ENSMUST00000157499 109 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm26170-201ENSMUST00000158419 148 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm24733-201ENSMUST00000158863 253 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm17366-201ENSMUST00000167629 187 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm23872-201ENSMUST00000175432 77 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm28934-201ENSMUST00000186491 346 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm43772-201ENSMUST00000202052 379 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 AV026068-216ENSMUST00000223874 328 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm13835-201ENSMUST00000118459 685 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm9208-201ENSMUST00000120468 948 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm20620-201ENSMUST00000177528 168 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm37719-201ENSMUST00000194615 292 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm19900-201ENSMUST00000207285 576 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm18592-201ENSMUST00000221529 276 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms