Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Mir466f-3-201ENSMUST00000104788 94 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm16423-201ENSMUST00000120078 947 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm14599-201ENSMUST00000120469 474 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm22655-201ENSMUST00000174949 96 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm19560-201ENSMUST00000177510 514 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm29509-201ENSMUST00000185716 321 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm21461-201ENSMUST00000200382 863 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm44432-201ENSMUST00000203342 938 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm44239-201ENSMUST00000204228 271 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm31166-201ENSMUST00000209326 288 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm5830-201ENSMUST00000049117 443 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm22684-201ENSMUST00000082849 132 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Mir466f-2-201ENSMUST00000104805 94 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm11105-201ENSMUST00000112781 478 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm14267-201ENSMUST00000119751 496 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm25102-201ENSMUST00000122479 112 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm26254-201ENSMUST00000122491 118 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm21772-201ENSMUST00000169213 478 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm17126-201ENSMUST00000172276 523 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Mir5125-201ENSMUST00000175240 79 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm20776-201ENSMUST00000189940 700 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm7887-201ENSMUST00000056948 537 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.37□□□□□ -1.39
Trim9Q8C7M3 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms