Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm25389-201ENSMUST00000157340 286 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm10319-202ENSMUST00000159439 846 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm2914-201ENSMUST00000186120 328 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm19936-201ENSMUST00000216414 838 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm18904-201ENSMUST00000218756 329 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm15840-201ENSMUST00000122099 943 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm15171-201ENSMUST00000122191 334 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm23954-201ENSMUST00000157213 353 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm25865-201ENSMUST00000158247 104 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm17223-201ENSMUST00000171413 481 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm27286-201ENSMUST00000184934 179 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm20954-201ENSMUST00000189078 644 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm34176-201ENSMUST00000192621 474 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm9278-201ENSMUST00000205508 553 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a6Q8C6K9 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Naip3-201ENSMUST00000118082 4208 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm44225-201ENSMUST00000203582 186 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms