Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm16335-201ENSMUST00000077495 309 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm7808-201ENSMUST00000082002 387 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm10221-201ENSMUST00000088299 309 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm26078-201ENSMUST00000104067 128 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm14874-201ENSMUST00000118995 438 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm12482-201ENSMUST00000120435 630 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm22311-201ENSMUST00000158006 110 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm22210-201ENSMUST00000158101 144 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm38122-201ENSMUST00000192679 885 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Mir6516-201ENSMUST00000196236 110 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm43516-201ENSMUST00000196891 322 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm43444-201ENSMUST00000198123 291 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm4742-201ENSMUST00000200261 771 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm6362-201ENSMUST00000217686 836 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Mir298-201ENSMUST00000083476 82 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 AW046200-203ENSMUST00000211787 2479 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trub1Q8C0D0 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm15233-201ENSMUST00000118747 400 ntBASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm16139-201ENSMUST00000160015 420 ntBASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm8941-201ENSMUST00000181451 899 ntBASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm44539-201ENSMUST00000206010 238 ntBASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Trub1Q8C0D0 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms