Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm23839-201ENSMUST00000116957 109 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm11561-201ENSMUST00000117429 417 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm15715-201ENSMUST00000118032 283 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm12850-201ENSMUST00000119210 436 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm20401-201ENSMUST00000173717 212 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm28188-201ENSMUST00000190483 236 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm2367-201ENSMUST00000192374 472 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm43078-201ENSMUST00000197222 168 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm9480-201ENSMUST00000198038 616 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm6520-201ENSMUST00000200636 410 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup54Q8BTS4 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
Nup54Q8BTS4 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm24265-201ENSMUST00000101833 141 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm22370-201ENSMUST00000102422 83 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm12189-201ENSMUST00000119779 912 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm25291-201ENSMUST00000122795 144 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm23233-201ENSMUST00000157301 137 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm24065-201ENSMUST00000157487 264 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm3170-201ENSMUST00000168753 850 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm22122-201ENSMUST00000175147 200 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm23872-201ENSMUST00000175432 77 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm3348-201ENSMUST00000177813 850 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm24407-201ENSMUST00000177864 141 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm38015-201ENSMUST00000193048 188 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm45249-201ENSMUST00000211021 348 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
Nup54Q8BTS4 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms