Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm11894-201ENSMUST00000121579 328 ntBASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm45008-201ENSMUST00000206420 493 ntBASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm45660-201ENSMUST00000210267 151 ntBASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Mir449a-201ENSMUST00000083641 91 ntBASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm14175-201ENSMUST00000119835 241 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm12267-201ENSMUST00000121609 761 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm14212-201ENSMUST00000122023 826 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm6223-201ENSMUST00000178436 871 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm24230-201ENSMUST00000104313 129 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm12808-201ENSMUST00000120597 404 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm22261-201ENSMUST00000158691 324 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm29592-201ENSMUST00000189434 370 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm4374-201ENSMUST00000204929 424 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm4032-201ENSMUST00000210886 487 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm20368-201ENSMUST00000220716 301 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Gm32526-201ENSMUST00000221878 981 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.13□□□□□ -1.43
Ccdc88cQ6VGS5 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc88cQ6VGS5 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.12□□□□□ -1.43
Ccdc88cQ6VGS5 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc88cQ6VGS5 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.12□□□□□ -1.43
Ccdc88cQ6VGS5 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc88cQ6VGS5 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Ccdc88cQ6VGS5 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc88cQ6VGS5 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc88cQ6VGS5 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms