Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm18248-201ENSMUST00000191164 1846 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm37092-201ENSMUST00000193381 1518 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm14896-201ENSMUST00000121311 1351 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trim41Q5NCC3 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim41Q5NCC3 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC12.15□□□□□ -0.47
Trim41Q5NCC3 Gm42671-201ENSMUST00000198013 1604 ntBASIC12.15□□□□□ -0.47
Trim41Q5NCC3 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim41Q5NCC3 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm24273-201ENSMUST00000102332 164 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm14670-201ENSMUST00000117327 337 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm15073-201ENSMUST00000117432 634 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm15349-201ENSMUST00000121154 204 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm13745-201ENSMUST00000121994 527 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm26086-201ENSMUST00000157902 263 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm23542-201ENSMUST00000158208 96 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm8256-201ENSMUST00000169178 453 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm6931-201ENSMUST00000183103 371 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm18117-201ENSMUST00000187720 742 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm38334-201ENSMUST00000195060 313 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm19786-201ENSMUST00000222589 580 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 AC137902.1-201ENSMUST00000228184 102 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gm25403-201ENSMUST00000082971 143 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 AC154612.1-202ENSMUST00000224806 1725 ntBASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim41Q5NCC3 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm37457-201ENSMUST00000193639 2433 ntBASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 CT009604.1-201ENSMUST00000223900 1328 ntBASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm10862-201ENSMUST00000193956 3350 ntBASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm13578-201ENSMUST00000120849 590 ntBASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm25667-201ENSMUST00000157701 275 ntBASIC12.13□□□□□ -0.47
Trim41Q5NCC3 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Mir7093-201ENSMUST00000184195 101 ntBASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm43850-201ENSMUST00000202021 578 ntBASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 AC138284.5-201ENSMUST00000214389 652 ntBASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC12.13□□□□□ -0.47
Trim41Q5NCC3 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm7676-201ENSMUST00000084055 319 ntBASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim41Q5NCC3 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm44242-201ENSMUST00000204212 2721 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm9427-201ENSMUST00000116187 651 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm14793-201ENSMUST00000118739 311 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm13368-201ENSMUST00000122443 430 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm25178-201ENSMUST00000122633 325 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms