Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm36262-201ENSMUST00000223274 499 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm23795-201ENSMUST00000084006 137 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm16423-201ENSMUST00000120078 947 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm12110-201ENSMUST00000121601 579 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm23233-201ENSMUST00000157301 137 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm6872-201ENSMUST00000165001 700 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm24957-201ENSMUST00000179604 132 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Mir7020-201ENSMUST00000183787 70 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm37503-201ENSMUST00000192088 319 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm43105-201ENSMUST00000202987 459 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Gm45750-201ENSMUST00000211966 354 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trafd1Q3UDK1 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm26300-201ENSMUST00000102282 94 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm13866-201ENSMUST00000118901 968 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm7079-201ENSMUST00000119726 171 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm22867-201ENSMUST00000157499 109 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm22724-201ENSMUST00000158091 127 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm25445-201ENSMUST00000158996 299 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm27024-201ENSMUST00000182561 755 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm20786-201ENSMUST00000212649 436 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trafd1Q3UDK1 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trafd1Q3UDK1 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Trafd1Q3UDK1 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trafd1Q3UDK1 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.59□□□□□ -1.52
Trafd1Q3UDK1 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.59□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms