Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm22794-201ENSMUST00000157228 306 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm22636-201ENSMUST00000158142 275 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm24733-201ENSMUST00000158863 253 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm4617-201ENSMUST00000178993 331 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm21392-201ENSMUST00000182950 972 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm27332-201ENSMUST00000184893 112 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm29357-201ENSMUST00000186877 698 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm18350-201ENSMUST00000187395 955 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm20811-201ENSMUST00000190500 553 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm29950-201ENSMUST00000195273 237 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Mir6906-201ENSMUST00000198998 58 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm20997-201ENSMUST00000205148 231 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm9373-201ENSMUST00000208724 599 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm8058-201ENSMUST00000217247 587 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm6362-201ENSMUST00000217686 836 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.68□□□□□ -1.5
Col8a1Q00780 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.68□□□□□ -1.5
Col8a1Q00780 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 AC164117.2-201ENSMUST00000222090 327 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm19154-201ENSMUST00000223330 940 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Olfr467-201ENSMUST00000084756 927 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm44231-201ENSMUST00000204106 4075 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm6866-201ENSMUST00000188559 2549 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm43728-201ENSMUST00000198817 2622 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 AC156636.1-201ENSMUST00000218639 2229 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Snhg17-209ENSMUST00000186993 3144 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm30698-201ENSMUST00000214789 3198 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Snord65-201ENSMUST00000104269 72 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm13983-201ENSMUST00000118018 865 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm16383-201ENSMUST00000118122 232 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm23164-201ENSMUST00000175084 111 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Mir3078-201ENSMUST00000175231 87 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm4956-202ENSMUST00000178869 672 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Mir7j-201ENSMUST00000184427 122 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm28353-201ENSMUST00000186482 570 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm28533-201ENSMUST00000186741 570 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm43383-201ENSMUST00000195981 469 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm5324-201ENSMUST00000208115 476 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm45673-201ENSMUST00000210293 358 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms