Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Scn1bP97952 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scn1bP97952 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn1bP97952 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Scn1bP97952 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scn1bP97952 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scn1bP97952 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn1bP97952 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn1bP97952 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scn1bP97952 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn1bP97952 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scn1bP97952 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn1bP97952 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn1bP97952 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scn1bP97952 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Scn1bP97952 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Scn1bP97952 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm22267-201ENSMUST00000104008 131 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm25877-201ENSMUST00000104326 129 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm16394-201ENSMUST00000117289 675 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm11484-201ENSMUST00000119808 338 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm13460-201ENSMUST00000121274 353 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm11679-201ENSMUST00000121830 779 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm23762-201ENSMUST00000158348 106 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm8582-201ENSMUST00000164061 789 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Scn1bP97952 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm27186-201ENSMUST00000184223 307 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm37503-201ENSMUST00000192088 319 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm36997-201ENSMUST00000195090 707 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm8869-201ENSMUST00000195222 947 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm18427-201ENSMUST00000195422 515 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm44403-201ENSMUST00000198554 129 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm44053-201ENSMUST00000203364 929 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm18600-201ENSMUST00000207205 505 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm5176-201ENSMUST00000218244 1227 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm5928-201ENSMUST00000221839 466 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm2614-201ENSMUST00000223227 403 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm23927-201ENSMUST00000082466 215 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Gm22005-201ENSMUST00000082795 141 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Scn1bP97952 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.27□□□□□ -1.57
Scn1bP97952 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Gm14976-201ENSMUST00000117055 1394 ntBASIC5.27□□□□□ -1.57
Scn1bP97952 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.27□□□□□ -1.57
Scn1bP97952 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scn1bP97952 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Scn1bP97952 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Scn1bP97952 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.26□□□□□ -1.57
Scn1bP97952 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.26□□□□□ -1.57
Scn1bP97952 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Scn1bP97952 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Scn1bP97952 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Scn1bP97952 Gm25785-201ENSMUST00000104129 125 ntBASIC5.26□□□□□ -1.57
Scn1bP97952 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scn1bP97952 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.26□□□□□ -1.57
Scn1bP97952 Gm11561-201ENSMUST00000117429 417 ntBASIC5.26□□□□□ -1.57
Scn1bP97952 Gm13455-201ENSMUST00000118767 517 ntBASIC5.26□□□□□ -1.57
Scn1bP97952 Gm15502-201ENSMUST00000121449 208 ntBASIC5.26□□□□□ -1.57
Scn1bP97952 Gm11385-201ENSMUST00000121513 570 ntBASIC5.26□□□□□ -1.57
Scn1bP97952 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.26□□□□□ -1.57
Scn1bP97952 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.26□□□□□ -1.57
Scn1bP97952 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Scn1bP97952 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scn1bP97952 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scn1bP97952 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.26□□□□□ -1.57
Scn1bP97952 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scn1bP97952 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC5.26□□□□□ -1.57
Scn1bP97952 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Scn1bP97952 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.26□□□□□ -1.57
Scn1bP97952 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.26□□□□□ -1.57
Scn1bP97952 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.26□□□□□ -1.57
Scn1bP97952 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms