Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm37140-201ENSMUST00000192914 1684 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm44440-201ENSMUST00000203139 2373 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm38198-201ENSMUST00000191772 3581 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm37076-201ENSMUST00000192033 2294 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm44530-201ENSMUST00000207920 3559 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm14267-201ENSMUST00000119751 496 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm13259-201ENSMUST00000120792 456 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm6175-201ENSMUST00000121351 400 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm24295-201ENSMUST00000158298 131 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm16112-201ENSMUST00000159075 382 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm18702-201ENSMUST00000196923 588 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm43554-201ENSMUST00000199987 186 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm18325-201ENSMUST00000203228 835 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm45628-201ENSMUST00000210849 274 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm2961-201ENSMUST00000211074 772 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm18587-201ENSMUST00000213736 841 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm7676-201ENSMUST00000084055 319 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm43328-201ENSMUST00000198544 1434 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm42531-201ENSMUST00000201648 4048 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 AC160029.1-201ENSMUST00000219628 2678 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm43211-201ENSMUST00000196901 1899 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 AC154755.2-201ENSMUST00000224384 2857 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Gm45548-201ENSMUST00000210076 3167 ntBASIC4.94□□□□□ -1.62
Nkx3-1P97436 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Nkx3-1P97436 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm38377-201ENSMUST00000193253 3772 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Xpo7-203ENSMUST00000226448 3663 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Lipe-203ENSMUST00000105177 1251 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm11911-201ENSMUST00000117938 1023 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm12074-201ENSMUST00000120189 219 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm13991-201ENSMUST00000120190 648 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm16200-201ENSMUST00000120385 331 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm11894-201ENSMUST00000121579 328 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm22261-201ENSMUST00000158691 324 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm3242-201ENSMUST00000171273 485 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm17511-201ENSMUST00000172206 342 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm5139-201ENSMUST00000175943 249 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms