Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.9□□□□□ -1.31
Sox1P53783 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.9□□□□□ -1.31
Sox1P53783 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox1P53783 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.9□□□□□ -1.31
Sox1P53783 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox1P53783 CR974429.2-201ENSMUST00000221883 1696 ntBASIC6.9□□□□□ -1.31
Sox1P53783 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Sox1P53783 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.9□□□□□ -1.31
Sox1P53783 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Sox1P53783 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Sox1P53783 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox1P53783 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox1P53783 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Sox1P53783 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Sox1P53783 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox1P53783 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Mir700-201ENSMUST00000102169 79 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox1P53783 Gm11913-201ENSMUST00000119094 336 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Gm14614-201ENSMUST00000119873 384 ntBASIC6.89□□□□□ -1.31
Sox1P53783 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.89□□□□□ -1.31
Sox1P53783 Gm25669-201ENSMUST00000157699 112 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Gm23995-201ENSMUST00000158060 129 ntBASIC6.89□□□□□ -1.31
Sox1P53783 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox1P53783 Gm19203-201ENSMUST00000174049 939 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Gm29259-201ENSMUST00000186396 694 ntBASIC6.89□□□□□ -1.31
Sox1P53783 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Gm8009-201ENSMUST00000191672 436 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Gm19185-201ENSMUST00000196365 643 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox1P53783 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC6.89□□□□□ -1.31
Sox1P53783 AC164567.4-201ENSMUST00000219708 483 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Gm17849-201ENSMUST00000219788 853 ntBASIC6.89□□□□□ -1.31
Sox1P53783 AC160114.1-201ENSMUST00000221930 365 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox1P53783 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox1P53783 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Sox1P53783 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox1P53783 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox1P53783 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 AC171003.1-201ENSMUST00000221667 1665 ntBASIC6.89□□□□□ -1.31
Sox1P53783 CT010505.3-201ENSMUST00000227835 1651 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox1P53783 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox1P53783 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.89□□□□□ -1.31
Sox1P53783 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox1P53783 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox1P53783 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox1P53783 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Gm37706-201ENSMUST00000195379 2765 ntBASIC6.88□□□□□ -1.31
Sox1P53783 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Gm45182-201ENSMUST00000207579 2404 ntBASIC6.88□□□□□ -1.31
Sox1P53783 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox1P53783 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.88□□□□□ -1.31
Sox1P53783 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Sox1P53783 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Sox1P53783 Gm13310-201ENSMUST00000120962 1381 ntBASIC6.88□□□□□ -1.31
Sox1P53783 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.88□□□□□ -1.31
Sox1P53783 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox1P53783 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.88□□□□□ -1.31
Sox1P53783 Gm14512-201ENSMUST00000117924 230 ntBASIC6.88□□□□□ -1.31
Sox1P53783 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC6.88□□□□□ -1.31
Sox1P53783 Gm3943-201ENSMUST00000118606 718 ntBASIC6.88□□□□□ -1.31
Sox1P53783 Gm12189-201ENSMUST00000119779 912 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms