Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Cux1P53564 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Cux1P53564 AC163731.1-201ENSMUST00000225696 3118 ntBASIC8.56□□□□□ -1.04
Cux1P53564 Gm23692-201ENSMUST00000101881 160 ntBASIC8.56□□□□□ -1.04
Cux1P53564 Gm11987-201ENSMUST00000118524 381 ntBASIC8.56□□□□□ -1.04
Cux1P53564 Gm12444-201ENSMUST00000121512 877 ntBASIC8.56□□□□□ -1.04
Cux1P53564 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC8.56□□□□□ -1.04
Cux1P53564 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Cux1P53564 Gm26170-201ENSMUST00000158419 148 ntBASIC8.56□□□□□ -1.04
Cux1P53564 Gm20674-201ENSMUST00000177452 369 ntBASIC8.56□□□□□ -1.04
Cux1P53564 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC8.56□□□□□ -1.04
Cux1P53564 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC8.56□□□□□ -1.04
Cux1P53564 Gm37882-201ENSMUST00000195254 196 ntBASIC8.56□□□□□ -1.04
Cux1P53564 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC8.56□□□□□ -1.04
Cux1P53564 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC8.56□□□□□ -1.04
Cux1P53564 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC8.56□□□□□ -1.04
Cux1P53564 Gm2099-201ENSMUST00000220979 412 ntBASIC8.56□□□□□ -1.04
Cux1P53564 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Cux1P53564 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC8.56□□□□□ -1.04
Cux1P53564 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC8.56□□□□□ -1.04
Cux1P53564 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Cux1P53564 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Cux1P53564 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Cux1P53564 Gm38026-201ENSMUST00000193284 3880 ntBASIC8.56□□□□□ -1.04
Cux1P53564 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Cux1P53564 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cux1P53564 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cux1P53564 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cux1P53564 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cux1P53564 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cux1P53564 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.55□□□□□ -1.04
Cux1P53564 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC8.55□□□□□ -1.04
Cux1P53564 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Cux1P53564 Gm26312-201ENSMUST00000157769 165 ntBASIC8.55□□□□□ -1.04
Cux1P53564 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Cux1P53564 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Cux1P53564 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Cux1P53564 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Cux1P53564 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Cux1P53564 Gm10784-201ENSMUST00000178715 238 ntBASIC8.55□□□□□ -1.04
Cux1P53564 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC8.55□□□□□ -1.04
Cux1P53564 Gm44776-201ENSMUST00000207212 381 ntBASIC8.55□□□□□ -1.04
Cux1P53564 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Cux1P53564 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cux1P53564 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
Cux1P53564 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Cux1P53564 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Cux1P53564 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC8.55□□□□□ -1.04
Cux1P53564 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
Cux1P53564 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cux1P53564 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Cux1P53564 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Cux1P53564 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC8.55□□□□□ -1.04
Cux1P53564 Gm38387-201ENSMUST00000191945 2577 ntBASIC8.55□□□□□ -1.04
Cux1P53564 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Cux1P53564 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Cux1P53564 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Cux1P53564 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC8.55□□□□□ -1.04
Cux1P53564 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Cux1P53564 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Cux1P53564 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Cux1P53564 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cux1P53564 Gm16007-201ENSMUST00000117837 286 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Defa-ps11-201ENSMUST00000119719 299 ntBASIC8.54□□□□□ -1.04
Cux1P53564 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC8.54□□□□□ -1.04
Cux1P53564 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cux1P53564 Mir7028-201ENSMUST00000185016 64 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Gm2914-201ENSMUST00000186120 328 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC8.54□□□□□ -1.04
Cux1P53564 Gm17952-201ENSMUST00000193914 747 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Mir409-201ENSMUST00000198153 79 ntBASIC8.54□□□□□ -1.04
Cux1P53564 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC8.54□□□□□ -1.04
Cux1P53564 CT025665.1-201ENSMUST00000215251 1199 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Gm4011-201ENSMUST00000174657 2555 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cux1P53564 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cux1P53564 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC8.54□□□□□ -1.04
Cux1P53564 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cux1P53564 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cux1P53564 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Cux1P53564 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cux1P53564 Gm43874-201ENSMUST00000204853 2798 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cux1P53564 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cux1P53564 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cux1P53564 Gm24160-201ENSMUST00000104594 126 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Gm11909-201ENSMUST00000121424 759 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC8.54□□□□□ -1.04
Cux1P53564 Olfr331-202ENSMUST00000170501 957 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms