Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Chd1P40201 Gm37926-201ENSMUST00000191922 2424 ntBASIC8.37□□□□□ -1.07
Chd1P40201 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC8.37□□□□□ -1.07
Chd1P40201 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC8.37□□□□□ -1.07
Chd1P40201 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.37□□□□□ -1.07
Chd1P40201 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Chd1P40201 Gm37106-201ENSMUST00000193760 1532 ntBASIC8.37□□□□□ -1.07
Chd1P40201 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Chd1P40201 Gm26034-201ENSMUST00000158154 116 ntBASIC8.37□□□□□ -1.07
Chd1P40201 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC8.37□□□□□ -1.07
Chd1P40201 Gm37836-201ENSMUST00000195875 175 ntBASIC8.37□□□□□ -1.07
Chd1P40201 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC8.37□□□□□ -1.07
Chd1P40201 Gm5045-201ENSMUST00000027054 810 ntBASIC8.37□□□□□ -1.07
Chd1P40201 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Chd1P40201 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC8.37□□□□□ -1.07
Chd1P40201 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Chd1P40201 Gm44584-201ENSMUST00000208395 2880 ntBASIC8.37□□□□□ -1.07
Chd1P40201 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Chd1P40201 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Chd1P40201 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Chd1P40201 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Chd1P40201 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Chd1P40201 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.36□□□□□ -1.07
Chd1P40201 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Chd1P40201 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.36□□□□□ -1.07
Chd1P40201 Gm23993-201ENSMUST00000157478 144 ntBASIC8.36□□□□□ -1.07
Chd1P40201 Gm26170-201ENSMUST00000158419 148 ntBASIC8.36□□□□□ -1.07
Chd1P40201 Gm27760-201ENSMUST00000185048 114 ntBASIC8.36□□□□□ -1.07
Chd1P40201 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Chd1P40201 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Chd1P40201 Ighv6-2-201ENSMUST00000192430 295 ntBASIC8.36□□□□□ -1.07
Chd1P40201 Gm43441-201ENSMUST00000201458 205 ntBASIC8.36□□□□□ -1.07
Chd1P40201 Gm17994-201ENSMUST00000209260 533 ntBASIC8.36□□□□□ -1.07
Chd1P40201 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC8.36□□□□□ -1.07
Chd1P40201 Mir194-1-201ENSMUST00000083647 67 ntBASIC8.36□□□□□ -1.07
Chd1P40201 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.36□□□□□ -1.07
Chd1P40201 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.36□□□□□ -1.07
Chd1P40201 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8.36□□□□□ -1.07
Chd1P40201 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Chd1P40201 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
Chd1P40201 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Chd1P40201 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Chd1P40201 Gm42989-201ENSMUST00000200646 2306 ntBASIC8.35□□□□□ -1.07
Chd1P40201 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Chd1P40201 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Chd1P40201 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Chd1P40201 Gm12807-201ENSMUST00000121546 962 ntBASIC8.35□□□□□ -1.07
Chd1P40201 Gm7840-201ENSMUST00000122086 533 ntBASIC8.35□□□□□ -1.07
Chd1P40201 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC8.35□□□□□ -1.07
Chd1P40201 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC8.35□□□□□ -1.07
Chd1P40201 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Chd1P40201 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Chd1P40201 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Chd1P40201 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Chd1P40201 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Chd1P40201 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Chd1P40201 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Chd1P40201 Gm45001-201ENSMUST00000208279 2515 ntBASIC8.35□□□□□ -1.07
Chd1P40201 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Chd1P40201 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Chd1P40201 Gm43360-201ENSMUST00000197656 2887 ntBASIC8.35□□□□□ -1.07
Chd1P40201 Gm38082-201ENSMUST00000192800 6882 ntBASIC8.35□□□□□ -1.07
Chd1P40201 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Chd1P40201 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Chd1P40201 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Chd1P40201 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Chd1P40201 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Chd1P40201 Gm7363-201ENSMUST00000119883 399 ntBASIC8.34□□□□□ -1.07
Chd1P40201 Gm6047-201ENSMUST00000167221 574 ntBASIC8.34□□□□□ -1.07
Chd1P40201 Gm8214-201ENSMUST00000172123 351 ntBASIC8.34□□□□□ -1.07
Chd1P40201 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Chd1P40201 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC8.34□□□□□ -1.07
Chd1P40201 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC8.34□□□□□ -1.07
Chd1P40201 AC154627.3-201ENSMUST00000228441 334 ntBASIC8.34□□□□□ -1.07
Chd1P40201 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Chd1P40201 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Chd1P40201 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Chd1P40201 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC8.34□□□□□ -1.07
Chd1P40201 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Chd1P40201 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Chd1P40201 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Chd1P40201 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Chd1P40201 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC8.34□□□□□ -1.07
Chd1P40201 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Chd1P40201 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Chd1P40201 Gm3978-201ENSMUST00000163406 2512 ntBASIC8.34□□□□□ -1.07
Chd1P40201 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC8.34□□□□□ -1.07
Chd1P40201 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC8.34□□□□□ -1.07
Chd1P40201 Gm28097-201ENSMUST00000187333 366 ntBASIC8.34□□□□□ -1.07
Chd1P40201 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC8.34□□□□□ -1.07
Chd1P40201 CT030194.1-201ENSMUST00000225507 532 ntBASIC8.34□□□□□ -1.07
Chd1P40201 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Chd1P40201 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Chd1P40201 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Chd1P40201 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chd1P40201 Gm37114-201ENSMUST00000195065 1804 ntBASIC8.33□□□□□ -1.08
Chd1P40201 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chd1P40201 Gm37086-201ENSMUST00000193082 3452 ntBASIC8.33□□□□□ -1.08
Chd1P40201 Gm13081-201ENSMUST00000121527 5599 ntBASIC8.33□□□□□ -1.08
Chd1P40201 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms