Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Snora44-201ENSMUST00000082670 129 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm11227-201ENSMUST00000119774 471 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm12322-201ENSMUST00000121605 389 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm38131-201ENSMUST00000192449 430 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm5735-201ENSMUST00000207053 167 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm45525-201ENSMUST00000210800 389 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm7990-201ENSMUST00000212126 593 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm10709-201ENSMUST00000213318 480 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm16335-201ENSMUST00000077495 309 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.1□□□□□ -1.43
Chmp6P0C0A3 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm13866-201ENSMUST00000118901 968 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm14106-201ENSMUST00000119382 438 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm23539-201ENSMUST00000157537 224 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm9027-201ENSMUST00000165914 661 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm27679-201ENSMUST00000184612 84 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm28885-201ENSMUST00000185615 563 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm37716-201ENSMUST00000193553 947 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm34149-201ENSMUST00000203547 304 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm18537-201ENSMUST00000205709 989 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp6P0C0A3 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Chmp6P0C0A3 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
Chmp6P0C0A3 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.09□□□□□ -1.44
Chmp6P0C0A3 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm11737-201ENSMUST00000118713 468 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm15194-201ENSMUST00000120453 434 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms