Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hcn3O88705 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Hcn3O88705 Gm25133-201ENSMUST00000082647 130 ntBASIC5.75□□□□□ -1.49
Hcn3O88705 Snora30-201ENSMUST00000083325 130 ntBASIC5.75□□□□□ -1.49
Hcn3O88705 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.75□□□□□ -1.49
Hcn3O88705 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Hcn3O88705 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hcn3O88705 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hcn3O88705 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hcn3O88705 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hcn3O88705 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hcn3O88705 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hcn3O88705 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hcn3O88705 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hcn3O88705 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm44562-201ENSMUST00000207194 1347 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hcn3O88705 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm18300-201ENSMUST00000192792 1406 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.74□□□□□ -1.49
Hcn3O88705 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.74□□□□□ -1.49
Hcn3O88705 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hcn3O88705 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hcn3O88705 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm26474-201ENSMUST00000116762 122 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm12392-201ENSMUST00000118014 938 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm11445-201ENSMUST00000119101 532 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm14098-201ENSMUST00000119295 623 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm24773-201ENSMUST00000158513 99 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm37024-201ENSMUST00000192224 868 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm37358-201ENSMUST00000195492 479 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm42708-201ENSMUST00000196332 905 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.74□□□□□ -1.49
Hcn3O88705 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 AC163621.2-201ENSMUST00000222229 682 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 AC162934.3-201ENSMUST00000223015 841 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm22581-201ENSMUST00000083735 136 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm10205-201ENSMUST00000087431 234 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hcn3O88705 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Hcn3O88705 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Hcn3O88705 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.74□□□□□ -1.49
Hcn3O88705 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.74□□□□□ -1.49
Hcn3O88705 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hcn3O88705 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hcn3O88705 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hcn3O88705 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hcn3O88705 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hcn3O88705 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hcn3O88705 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hcn3O88705 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hcn3O88705 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hcn3O88705 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hcn3O88705 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hcn3O88705 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.73□□□□□ -1.49
Hcn3O88705 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hcn3O88705 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Hcn3O88705 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hcn3O88705 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hcn3O88705 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Hcn3O88705 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hcn3O88705 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Hcn3O88705 Gm22284-201ENSMUST00000104132 132 ntBASIC5.73□□□□□ -1.49
Hcn3O88705 Mir1192-201ENSMUST00000116976 121 ntBASIC5.73□□□□□ -1.49
Hcn3O88705 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.73□□□□□ -1.49
Hcn3O88705 Gm12099-201ENSMUST00000118660 750 ntBASIC5.73□□□□□ -1.49
Hcn3O88705 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC5.73□□□□□ -1.49
Hcn3O88705 Gm12587-201ENSMUST00000120180 427 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms