Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm5512-201ENSMUST00000218013 1353 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm36936-201ENSMUST00000194508 2749 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm38387-201ENSMUST00000191945 2577 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 AC115289.2-201ENSMUST00000223836 2803 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm9311-201ENSMUST00000118042 1269 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm11445-201ENSMUST00000119101 532 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm15493-201ENSMUST00000119461 528 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm12488-201ENSMUST00000122449 499 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm8715-201ENSMUST00000162728 531 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Mir8114-201ENSMUST00000183582 111 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm28660-201ENSMUST00000186496 253 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Hmgb3O54879 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm31306-201ENSMUST00000197517 508 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm6520-201ENSMUST00000200636 410 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm44279-201ENSMUST00000205154 472 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm6828-201ENSMUST00000207902 1186 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC4.49□□□□□ -1.69
Hmgb3O54879 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm19007-201ENSMUST00000217746 874 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 AC153357.1-201ENSMUST00000219190 482 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 n-R5s41-201ENSMUST00000083025 119 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Hmgb3O54879 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb3O54879 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Hmgb3O54879 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm16270-201ENSMUST00000160327 3238 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb3O54879 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb3O54879 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm37356-201ENSMUST00000193362 1613 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Hmgb3O54879 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm24434-201ENSMUST00000104081 132 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Hmgb3O54879 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Hmgb3O54879 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm11624-201ENSMUST00000118579 1041 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm14783-201ENSMUST00000118900 663 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm12293-201ENSMUST00000121898 590 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm15022-201ENSMUST00000122074 746 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Rps29-ps-201ENSMUST00000122083 172 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm23233-201ENSMUST00000157301 137 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm26069-201ENSMUST00000157497 277 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm6434-201ENSMUST00000163316 372 ntBASIC4.48□□□□□ -1.69
Hmgb3O54879 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC4.48□□□□□ -1.69
Hmgb3O54879 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC4.48□□□□□ -1.69
Hmgb3O54879 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hmgb3O54879 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms