Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 AC156636.1-201ENSMUST00000218639 2229 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm10652-201ENSMUST00000199790 2622 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm13770-201ENSMUST00000117149 305 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm16128-201ENSMUST00000117855 626 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm13491-201ENSMUST00000118267 235 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm14769-201ENSMUST00000118590 432 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28604-201ENSMUST00000186629 484 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28566-201ENSMUST00000186714 484 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28194-201ENSMUST00000187412 484 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28886-202ENSMUST00000187889 484 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28554-202ENSMUST00000189175 484 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29213-202ENSMUST00000189703 484 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28851-202ENSMUST00000189757 484 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28461-201ENSMUST00000190023 484 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 AC134577.3-201ENSMUST00000226490 3000 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms