Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
PdfS4R2K0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.7□□□□□ -0.22
PdfS4R2K0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PdfS4R2K0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
PdfS4R2K0 Gm8495-201ENSMUST00000188740 694 ntBASIC13.7□□□□□ -0.22
PdfS4R2K0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.7□□□□□ -0.22
PdfS4R2K0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PdfS4R2K0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.7□□□□□ -0.22
PdfS4R2K0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PdfS4R2K0 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.69□□□□□ -0.22
PdfS4R2K0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.69□□□□□ -0.22
PdfS4R2K0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PdfS4R2K0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.69□□□□□ -0.22
PdfS4R2K0 Gm12251-201ENSMUST00000117893 792 ntBASIC13.69□□□□□ -0.22
PdfS4R2K0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Gm18284-201ENSMUST00000172604 624 ntBASIC13.69□□□□□ -0.22
PdfS4R2K0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.69□□□□□ -0.22
PdfS4R2K0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.69□□□□□ -0.22
PdfS4R2K0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PdfS4R2K0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.69□□□□□ -0.22
PdfS4R2K0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PdfS4R2K0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdfS4R2K0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PdfS4R2K0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.68□□□□□ -0.22
PdfS4R2K0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.68□□□□□ -0.22
PdfS4R2K0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PdfS4R2K0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
PdfS4R2K0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.68□□□□□ -0.22
PdfS4R2K0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
PdfS4R2K0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PdfS4R2K0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.67□□□□□ -0.22
PdfS4R2K0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Smad6-203ENSMUST00000179458 273 ntBASIC13.67□□□□□ -0.22
PdfS4R2K0 Gm43060-201ENSMUST00000200621 289 ntBASIC13.67□□□□□ -0.22
PdfS4R2K0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.67□□□□□ -0.22
PdfS4R2K0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.67□□□□□ -0.22
PdfS4R2K0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PdfS4R2K0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms