Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1S4R1E0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.21■□□□□ 0.18
H2afb1S4R1E0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
H2afb1S4R1E0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Gm10493-201ENSMUST00000097270 612 ntBASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.19■□□□□ 0.18
H2afb1S4R1E0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1S4R1E0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1S4R1E0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1S4R1E0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms