Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmg20bQ9Z104 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Gm12896-201ENSMUST00000118430 226 ntBASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmg20bQ9Z104 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.08■□□□□ 0.96
Hmg20bQ9Z104 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmg20bQ9Z104 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmg20bQ9Z104 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmg20bQ9Z104 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmg20bQ9Z104 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Gm10418-201ENSMUST00000100943 576 ntBASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmg20bQ9Z104 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Gm12441-201ENSMUST00000121806 588 ntBASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmg20bQ9Z104 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Mtag2-201ENSMUST00000058665 714 ntBASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmg20bQ9Z104 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Gm29791-202ENSMUST00000207888 369 ntBASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmg20bQ9Z104 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Gm11249-201ENSMUST00000117071 859 ntBASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Mir6349-201ENSMUST00000184059 97 ntBASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Gm10138-203ENSMUST00000206952 366 ntBASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmg20bQ9Z104 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms