Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Dio3-201ENSMUST00000097228 1449 ntBASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Gm12896-201ENSMUST00000118430 226 ntBASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn3Q9Z0G9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn3Q9Z0G9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn3Q9Z0G9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Cldn3Q9Z0G9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn3Q9Z0G9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Cldn3Q9Z0G9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn3Q9Z0G9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 Gm11927-201ENSMUST00000118472 759 ntBASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 Gm20049-201ENSMUST00000219950 730 ntBASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 Fst-202ENSMUST00000223640 2612 ntBASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn3Q9Z0G9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn3Q9Z0G9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.07■□□□□ 0.48
Cldn3Q9Z0G9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn3Q9Z0G9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn3Q9Z0G9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn3Q9Z0G9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn3Q9Z0G9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn3Q9Z0G9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.07■□□□□ 0.48
Cldn3Q9Z0G9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn3Q9Z0G9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn3Q9Z0G9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn3Q9Z0G9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn3Q9Z0G9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn3Q9Z0G9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms