Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cr1Q9Z0D9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cr1Q9Z0D9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms