Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClcnkaQ9WUB7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Gm44549-201ENSMUST00000208351 577 ntBASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ClcnkaQ9WUB7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Fst-202ENSMUST00000223640 2612 ntBASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ClcnkaQ9WUB7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClcnkaQ9WUB7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ClcnkaQ9WUB7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms