Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Mir5133-201ENSMUST00000174955 77 ntBASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps29Q9QZ88 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps29Q9QZ88 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Gm2399-201ENSMUST00000104944 225 ntBASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Gm13148-201ENSMUST00000118892 745 ntBASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.1■□□□□ 0.33
Vps29Q9QZ88 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Gm44549-201ENSMUST00000208351 577 ntBASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps29Q9QZ88 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps29Q9QZ88 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps29Q9QZ88 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.08■□□□□ 0.33
Vps29Q9QZ88 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vps29Q9QZ88 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps29Q9QZ88 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.08■□□□□ 0.32
Vps29Q9QZ88 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vps29Q9QZ88 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.08■□□□□ 0.32
Vps29Q9QZ88 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Vps29Q9QZ88 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps29Q9QZ88 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vps29Q9QZ88 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps29Q9QZ88 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Gm26524-201ENSMUST00000192339 390 ntBASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Gm38285-201ENSMUST00000192928 922 ntBASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps29Q9QZ88 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps29Q9QZ88 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps29Q9QZ88 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps29Q9QZ88 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vps29Q9QZ88 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vps29Q9QZ88 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.06■□□□□ 0.32
Vps29Q9QZ88 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms