Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom3Q9QXN0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom3Q9QXN0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom3Q9QXN0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Idnk-204ENSMUST00000226010 1898 ntBASIC17.92■□□□□ 0.46
Shroom3Q9QXN0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom3Q9QXN0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Mir5122-201ENSMUST00000175004 89 ntBASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Gm38285-201ENSMUST00000192928 922 ntBASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.9■□□□□ 0.46
Shroom3Q9QXN0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Shroom3Q9QXN0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Shroom3Q9QXN0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom3Q9QXN0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom3Q9QXN0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom3Q9QXN0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom3Q9QXN0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.89■□□□□ 0.45
Shroom3Q9QXN0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.89■□□□□ 0.45
Shroom3Q9QXN0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.89■□□□□ 0.45
Shroom3Q9QXN0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom3Q9QXN0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom3Q9QXN0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom3Q9QXN0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Gm15378-201ENSMUST00000121894 207 ntBASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms