Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.92■□□□□ 0.62
Rfx5Q9JL61 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx5Q9JL61 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx5Q9JL61 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfx5Q9JL61 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.89■□□□□ 0.61
Rfx5Q9JL61 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx5Q9JL61 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rfx5Q9JL61 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx5Q9JL61 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.89■□□□□ 0.61
Rfx5Q9JL61 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
Rfx5Q9JL61 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx5Q9JL61 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx5Q9JL61 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.89■□□□□ 0.61
Rfx5Q9JL61 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx5Q9JL61 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx5Q9JL61 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx5Q9JL61 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx5Q9JL61 Gm13401-201ENSMUST00000117074 291 ntBASIC18.88■□□□□ 0.61
Rfx5Q9JL61 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
Rfx5Q9JL61 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx5Q9JL61 Gm10812-201ENSMUST00000099864 546 ntBASIC18.88■□□□□ 0.61
Rfx5Q9JL61 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Rfx5Q9JL61 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx5Q9JL61 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx5Q9JL61 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx5Q9JL61 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Gm11643-201ENSMUST00000119578 864 ntBASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx5Q9JL61 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.86■□□□□ 0.61
Rfx5Q9JL61 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms