Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trem3Q9JKE1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.46□□□□□ -0.09
Trem3Q9JKE1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trem3Q9JKE1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trem3Q9JKE1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trem3Q9JKE1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trem3Q9JKE1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trem3Q9JKE1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trem3Q9JKE1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trem3Q9JKE1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem3Q9JKE1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem3Q9JKE1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Gm13234-201ENSMUST00000120010 747 ntBASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trem3Q9JKE1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms