Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Il3ra-202ENSMUST00000223589 738 ntBASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Mir5130-201ENSMUST00000175160 84 ntBASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Gm22697-201ENSMUST00000175194 63 ntBASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1fQ9JIS7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Gm17661-201ENSMUST00000170317 270 ntBASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1fQ9JIS7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cacna1fQ9JIS7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.39■□□□□ 0.86
Cacna1fQ9JIS7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cacna1fQ9JIS7 Gm13474-201ENSMUST00000122466 815 ntBASIC20.39■□□□□ 0.86
Cacna1fQ9JIS7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cacna1fQ9JIS7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1fQ9JIS7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1fQ9JIS7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1fQ9JIS7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1fQ9JIS7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1fQ9JIS7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1fQ9JIS7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1fQ9JIS7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1fQ9JIS7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1fQ9JIS7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1fQ9JIS7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1fQ9JIS7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Cacna1fQ9JIS7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1fQ9JIS7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.37■□□□□ 0.85
Cacna1fQ9JIS7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1fQ9JIS7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1fQ9JIS7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1fQ9JIS7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cacna1fQ9JIS7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.37■□□□□ 0.85
Cacna1fQ9JIS7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cacna1fQ9JIS7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1fQ9JIS7 Gm9103-201ENSMUST00000119371 405 ntBASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.35■□□□□ 0.85
Cacna1fQ9JIS7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms