Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Gm42569-201ENSMUST00000200539 472 ntBASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ClpxQ9JHS4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClpxQ9JHS4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClpxQ9JHS4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.33■□□□□ 0.21
ClpxQ9JHS4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClpxQ9JHS4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ClpxQ9JHS4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClpxQ9JHS4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClpxQ9JHS4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClpxQ9JHS4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClpxQ9JHS4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpxQ9JHS4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpxQ9JHS4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ClpxQ9JHS4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms