Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.8■□□□□ 0.44
OtofQ9ESF1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
OtofQ9ESF1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
OtofQ9ESF1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OtofQ9ESF1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
OtofQ9ESF1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.79■□□□□ 0.44
OtofQ9ESF1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Gm18959-201ENSMUST00000208954 655 ntBASIC17.79■□□□□ 0.44
OtofQ9ESF1 Gm4974-201ENSMUST00000209974 875 ntBASIC17.79■□□□□ 0.44
OtofQ9ESF1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
OtofQ9ESF1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Gm6659-201ENSMUST00000174752 547 ntBASIC17.78■□□□□ 0.44
OtofQ9ESF1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.78■□□□□ 0.44
OtofQ9ESF1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
OtofQ9ESF1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.78■□□□□ 0.44
OtofQ9ESF1 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.78■□□□□ 0.44
OtofQ9ESF1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
OtofQ9ESF1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Gm18032-201ENSMUST00000222541 538 ntBASIC17.77■□□□□ 0.44
OtofQ9ESF1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
OtofQ9ESF1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
OtofQ9ESF1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
OtofQ9ESF1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
OtofQ9ESF1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.77■□□□□ 0.43
OtofQ9ESF1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OtofQ9ESF1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.76■□□□□ 0.43
OtofQ9ESF1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
OtofQ9ESF1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.75■□□□□ 0.43
OtofQ9ESF1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OtofQ9ESF1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms