Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Vps35Q9EQH3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Vps35Q9EQH3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps35Q9EQH3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps35Q9EQH3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Gm12896-201ENSMUST00000118430 226 ntBASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps35Q9EQH3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps35Q9EQH3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Vps35Q9EQH3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Flg-201ENSMUST00000050758 1488 ntBASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps35Q9EQH3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps35Q9EQH3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps35Q9EQH3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Gm37856-201ENSMUST00000191634 999 ntBASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.85■□□□□ 0.45
Vps35Q9EQH3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms