Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a3bpQ9EQG9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a3bpQ9EQG9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.47■□□□□ 0.87
Col4a3bpQ9EQG9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.47■□□□□ 0.87
Col4a3bpQ9EQG9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a3bpQ9EQG9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a3bpQ9EQG9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Gm26524-201ENSMUST00000192339 390 ntBASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a3bpQ9EQG9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Col4a3bpQ9EQG9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a3bpQ9EQG9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a3bpQ9EQG9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a3bpQ9EQG9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a3bpQ9EQG9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a3bpQ9EQG9 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.45■□□□□ 0.86
Col4a3bpQ9EQG9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a3bpQ9EQG9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a3bpQ9EQG9 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Col4a3bpQ9EQG9 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a3bpQ9EQG9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Idnk-204ENSMUST00000226010 1898 ntBASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a3bpQ9EQG9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms