Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn3Q9DCB1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn3Q9DCB1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn3Q9DCB1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn3Q9DCB1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn3Q9DCB1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn3Q9DCB1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn3Q9DCB1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn3Q9DCB1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Hmgn3Q9DCB1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn3Q9DCB1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn3Q9DCB1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Hmgn3Q9DCB1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn3Q9DCB1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn3Q9DCB1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Gm9847-201ENSMUST00000052528 599 ntBASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hmgn3Q9DCB1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms