Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Gm43930-201ENSMUST00000203868 845 ntBASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Gm10602-201ENSMUST00000098239 609 ntBASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf225Q9D7D1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Flg-201ENSMUST00000050758 1488 ntBASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rnf225Q9D7D1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf225Q9D7D1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf225Q9D7D1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rnf225Q9D7D1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.76■□□□□ 0.59
Rnf225Q9D7D1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf225Q9D7D1 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.76■□□□□ 0.59
Rnf225Q9D7D1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.76■□□□□ 0.59
Rnf225Q9D7D1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Dio3-201ENSMUST00000097228 1449 ntBASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rnf225Q9D7D1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf225Q9D7D1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Mir2861-201ENSMUST00000175539 82 ntBASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf225Q9D7D1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf225Q9D7D1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.71■□□□□ 0.59
Rnf225Q9D7D1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf225Q9D7D1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms