Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lonrf3Q9D4H7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Mir2861-201ENSMUST00000175539 82 ntBASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lonrf3Q9D4H7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lonrf3Q9D4H7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lonrf3Q9D4H7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lonrf3Q9D4H7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lonrf3Q9D4H7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lonrf3Q9D4H7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lonrf3Q9D4H7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lonrf3Q9D4H7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lonrf3Q9D4H7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.62■□□□□ 0.89
Lonrf3Q9D4H7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lonrf3Q9D4H7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms