Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.85■□□□□ 0.45
Trim42Q9D2H5 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim42Q9D2H5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim42Q9D2H5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim42Q9D2H5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim42Q9D2H5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trim42Q9D2H5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trim42Q9D2H5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Smad6-203ENSMUST00000179458 273 ntBASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim42Q9D2H5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim42Q9D2H5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim42Q9D2H5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms