Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Gm43060-201ENSMUST00000200621 289 ntBASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssu72Q9CY97 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssu72Q9CY97 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Haglr-201ENSMUST00000100000 2085 ntBASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Gm27454-201ENSMUST00000185090 204 ntBASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ssu72Q9CY97 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.77■□□□□ 0.43
Ssu72Q9CY97 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Ssu72Q9CY97 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssu72Q9CY97 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssu72Q9CY97 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssu72Q9CY97 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssu72Q9CY97 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Gm43017-201ENSMUST00000198296 752 ntBASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssu72Q9CY97 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssu72Q9CY97 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms