Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm12933-201ENSMUST00000120203 872 ntBASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Khdc3Q9CWU5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Khdc3Q9CWU5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Khdc3Q9CWU5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Khdc3Q9CWU5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Gm26524-201ENSMUST00000192339 390 ntBASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Khdc3Q9CWU5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc3Q9CWU5 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.11■□□□□ 0.33
Khdc3Q9CWU5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc3Q9CWU5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Khdc3Q9CWU5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc3Q9CWU5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc3Q9CWU5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc3Q9CWU5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Khdc3Q9CWU5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Khdc3Q9CWU5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.11■□□□□ 0.33
Khdc3Q9CWU5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms