Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Smc3Q9CW03 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc3Q9CW03 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.02■□□□□ 0.96
Smc3Q9CW03 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc3Q9CW03 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smc3Q9CW03 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.01■□□□□ 0.95
Smc3Q9CW03 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Gm42642-201ENSMUST00000200683 355 ntBASIC21.01■□□□□ 0.95
Smc3Q9CW03 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc3Q9CW03 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Smc3Q9CW03 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc3Q9CW03 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc3Q9CW03 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21■□□□□ 0.95
Smc3Q9CW03 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc3Q9CW03 Gm9954-202ENSMUST00000198686 4725 ntBASIC21■□□□□ 0.95
Smc3Q9CW03 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc3Q9CW03 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc3Q9CW03 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Smc3Q9CW03 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smc3Q9CW03 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smc3Q9CW03 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smc3Q9CW03 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Smc3Q9CW03 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc3Q9CW03 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc3Q9CW03 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc3Q9CW03 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc3Q9CW03 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smc3Q9CW03 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc3Q9CW03 Gm8969-201ENSMUST00000199694 526 ntBASIC20.98■□□□□ 0.95
Smc3Q9CW03 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.98■□□□□ 0.95
Smc3Q9CW03 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.98■□□□□ 0.95
Smc3Q9CW03 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.98■□□□□ 0.95
Smc3Q9CW03 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smc3Q9CW03 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc3Q9CW03 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc3Q9CW03 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc3Q9CW03 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.96■□□□□ 0.95
Smc3Q9CW03 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc3Q9CW03 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc3Q9CW03 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smc3Q9CW03 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Smc3Q9CW03 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smc3Q9CW03 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc3Q9CW03 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc3Q9CW03 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc3Q9CW03 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc3Q9CW03 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc3Q9CW03 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.95■□□□□ 0.94
Smc3Q9CW03 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms