Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Mir6349-201ENSMUST00000184059 97 ntBASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otud1Q9CUB6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otud1Q9CUB6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Otud1Q9CUB6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Otud1Q9CUB6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Otud1Q9CUB6 Gm12382-201ENSMUST00000122005 922 ntBASIC16.83■□□□□ 0.28
Otud1Q9CUB6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.83■□□□□ 0.28
Otud1Q9CUB6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Otud1Q9CUB6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Otud1Q9CUB6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otud1Q9CUB6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Otud1Q9CUB6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otud1Q9CUB6 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.83■□□□□ 0.28
Otud1Q9CUB6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otud1Q9CUB6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Otud1Q9CUB6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Otud1Q9CUB6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otud1Q9CUB6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otud1Q9CUB6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Grk6-206ENSMUST00000224995 2971 ntBASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Otud1Q9CUB6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms