Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Q9CR55 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.6■□□□□ 0.25
Q9CR55 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Q9CR55 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q9CR55 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q9CR55 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q9CR55 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q9CR55 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q9CR55 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.59■□□□□ 0.25
Q9CR55 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q9CR55 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q9CR55 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Q9CR55 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q9CR55 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q9CR55 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Q9CR55 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Q9CR55 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Q9CR55 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Q9CR55 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Q9CR55 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Q9CR55 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Q9CR55 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Q9CR55 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.58■□□□□ 0.24
Q9CR55 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q9CR55 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Q9CR55 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.58■□□□□ 0.24
Q9CR55 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q9CR55 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Q9CR55 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q9CR55 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Q9CR55 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q9CR55 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q9CR55 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q9CR55 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.57■□□□□ 0.24
Q9CR55 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.57■□□□□ 0.24
Q9CR55 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q9CR55 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.57■□□□□ 0.24
Q9CR55 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.57■□□□□ 0.24
Q9CR55 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q9CR55 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q9CR55 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.57■□□□□ 0.24
Q9CR55 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q9CR55 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q9CR55 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Q9CR55 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Q9CR55 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.56■□□□□ 0.24
Q9CR55 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.56■□□□□ 0.24
Q9CR55 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.56■□□□□ 0.24
Q9CR55 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Q9CR55 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Q9CR55 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q9CR55 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Q9CR55 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
Q9CR55 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.55■□□□□ 0.24
Q9CR55 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Gm12821-201ENSMUST00000120022 600 ntBASIC16.55■□□□□ 0.24
Q9CR55 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.55■□□□□ 0.24
Q9CR55 Gm8969-201ENSMUST00000199694 526 ntBASIC16.55■□□□□ 0.24
Q9CR55 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.55■□□□□ 0.24
Q9CR55 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Q9CR55 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Q9CR55 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms