Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm7370-201ENSMUST00000219471 767 ntBASIC18.35■□□□□ 0.53
Cldnd1Q9CQX5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldnd1Q9CQX5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.35■□□□□ 0.53
Cldnd1Q9CQX5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cldnd1Q9CQX5 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.35■□□□□ 0.53
Cldnd1Q9CQX5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldnd1Q9CQX5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Mir1668-201ENSMUST00000184114 107 ntBASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldnd1Q9CQX5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cldnd1Q9CQX5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldnd1Q9CQX5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldnd1Q9CQX5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldnd1Q9CQX5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldnd1Q9CQX5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldnd1Q9CQX5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldnd1Q9CQX5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.33■□□□□ 0.52
Cldnd1Q9CQX5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldnd1Q9CQX5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.31■□□□□ 0.52
Cldnd1Q9CQX5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldnd1Q9CQX5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldnd1Q9CQX5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cldnd1Q9CQX5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cldnd1Q9CQX5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cldnd1Q9CQX5 Gm24841-201ENSMUST00000158676 357 ntBASIC18.29■□□□□ 0.52
Cldnd1Q9CQX5 Gm7213-201ENSMUST00000215977 950 ntBASIC18.29■□□□□ 0.52
Cldnd1Q9CQX5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldnd1Q9CQX5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldnd1Q9CQX5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldnd1Q9CQX5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cldnd1Q9CQX5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms